Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890936.1_cds_XP_016445636.1_40579
CDS Infomation

[gene=LOC107770819] [db_xref=GeneID:107770819] [protein=PTI1-like tyrosine-protein kinase 2 isoform X3] [protein_id=XP_016445636.1] [location=join(53330..53344,53436..54233,54794..55030,55118..55267,55743..55895)] [gbkey=CDS]
Sequence

ATGCAGCAGCCCCTGTCCAGTGATCAGATTGTTGGCAAACTTTTGAAAGAATTGCCTCCT
ACTTGCTTACTTCTTGTAATGGATAAGGGAGGAAAAGTCCTACTCCAGAAGTCGGGGACT
TCACAAGAAGGCGCTCCAATTAAAGTTCTACATTCATCTGAGTCCTCTCTGTCAGCTTCC
AGCAGCTCTACAGAATCGAGAAATAAGTATCAGATTCAAAAATCTTTGTCAATGCCGTGT
TCCTCAACATCAACGTCATCACAGCCGACTGAAAATGCAACTTTTCCTAGGACCAGGAAG
TATTTGCAGCACAAAAATACTGCAGCTAAGAATCTGTTTCAGAGGTTAGCTTACTTAGAG
ATGATTTGCTGCACCAGACGCTTCACAATTGATGAACTTAGATGTGCAACAGATAACTTC
AGTCCCAATCTGTTGACTGGAGAGGGTGGTCATAGTAGAGTCTATCGAGCTAATCTCGAC
AACGGGCAGGTTGCAGCAGTGAAAGTCCTTAAAAACACACAATATTCCGAAGATGATCTG
TTCGGGGAAGTTGAAATATTGAGCAATCTGAAACACGAGAACATAATTCAGCTTGTCGGT
TACTGTTACAGTAAAGACATGGAAGCAATCGTGTATAATCTACTGAAGGACAGTTTAAAG
CAAAGGCTAAAACAGCTTAATTGGAACACAAGGATGCAAGTTGCTATAGGAGTGGCAAGG
GGATTAGAATACCTCCATTCTCAAACCCCTCCTATCATTCACAGAGATGTGAAATCATCA
AACATTCTCTTATCTGGCGATTGCCACCCACAACTATCAGATTTTGGAGCAGCAGTAGTA
CACCAGCAAACTCAGCAAGATTCAGCTTTTGTGAAACCAGTTCACGTTGTTGGGACATTT
GGATACCTGGCGCCTGAGTACATTATGTATGGCAAAGTTGATGAAAAGATAGATGTATAC
TCTTACGGGGTAGTCCTGTTGGAATTGATCACAGGGAAAGAGGCCATCCAAACAGACCTG
GAATCTCATCATGAAAGCTTAGTGCTGTGGGCGAGGTCTCTACTCAGTTGCGGTCTTTGT
GATCTTCTTGTTGATCCTGACTTAAGCGAGAACTACAACAAAGATGAGATGAAAACAGTG
ATTCTTGCAGCACGGCTCTGCCTCTTGCATTCATCTTCAAGGAGGCCAACGATGAAAACA
ATTCTGCGTTTATTTGAGGAGCCAGAGCACTGGTTAGAACTGCAGAGAAGGAGAGAAGAG
CTTCTGGATGGAATTGGTTTGAAAGATGAAAGTTGCTTGTGCAGATGCTACGCATCAGAT
TCTGATGAGACCATGTTGATAGAGGATGGCTAA

Peptide Sequence

PEP ID

XP_016445636.1
PEP Infomation

PREDICTED: PTI1-like tyrosine-protein kinase 2 isoform X3 [Nicotiana tabacum]
Sequence

MQQPLSSDQIVGKLLKELPPTCLLLVMDKGGKVLLQKSGTSQEGAPIKVLHSSESSLSAS
SSSTESRNKYQIQKSLSMPCSSTSTSSQPTENATFPRTRKYLQHKNTAAKNLFQRLAYLE
MICCTRRFTIDELRCATDNFSPNLLTGEGGHSRVYRANLDNGQVAAVKVLKNTQYSEDDL
FGEVEILSNLKHENIIQLVGYCYSKDMEAIVYNLLKDSLKQRLKQLNWNTRMQVAIGVAR
GLEYLHSQTPPIIHRDVKSSNILLSGDCHPQLSDFGAAVVHQQTQQDSAFVKPVHVVGTF
GYLAPEYIMYGKVDEKIDVYSYGVVLLELITGKEAIQTDLESHHESLVLWARSLLSCGLC
DLLVDPDLSENYNKDEMKTVILAARLCLLHSSSRRPTMKTILRLFEEPEHWLELQRRREE
LLDGIGLKDESCLCRCYASDSDETMLIEDG

Transcript Sequence

Gene sequence data has not been registered.